Insertion junction: LMJ.RY0402.042231_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.042231
Chromosome:chromosome 16
Location:5946903
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g677001 (1 of 1) PTHR31596:SF1 - T-CELL ACTIVATION INHIBITOR, MITOCHONDRIAL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAACCCCTCCCCCCACACACGTACCTG
Internal bar code:CGAAGGGGCCATCGCCAATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:517
LEAP-Seq percent confirming:98.6704
LEAP-Seq n confirming:1410
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGGTGTTTACGTGTGCT
Suggested primer 2:AAGGTGGAACTCACACTGCC