Insertion junction: LMJ.RY0402.042321_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.042321
Chromosome:chromosome 3
Location:8012827
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g201550 MMP20 Matrix metalloproteinase; (1 of 1) IPR000095//IPR008752 - CRIB domain // Peptidase M11, gametolysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGCGAGGGCGCTGGCGGTAGCTGCTGCG
Internal bar code:CGATGGCTAATTCCACTTTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:618
LEAP-Seq percent confirming:98.2622
LEAP-Seq n confirming:9443
LEAP-Seq n nonconfirming:167
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCCCTAACCAGCCTCCAT
Suggested primer 2:CCTGACAGAGGCAGTCATCA