Insertion junction: LMJ.RY0402.042348_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.042348
Chromosome:chromosome 17
Location:2113213
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre17.g712400 TERC1,TERC Thylakoid protein integration factor; (1 of 1) PTHR30238:SF0 - PROTEIN PIGMENT DEFECTIVE 149 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCCACAGCGCGCGAGTGGTCAGCAACGT
Internal bar code:AGTGTATTCTAGAGGCGTTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:200
LEAP-Seq percent confirming:99.758
LEAP-Seq n confirming:2473
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTTCTCCAGGTTGTCCAT
Suggested primer 2:GAAGTTGGTGCCGTCGTATT