Insertion junction: LMJ.RY0402.042843_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.042843
Chromosome:chromosome 4
Location:1345058
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre04.g214550 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAAGCTTGAAGCACAAGTGTGAGGACGAC
Internal bar code:TTAGAGGCTAAGTACTATACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:609
LEAP-Seq percent confirming:52.0202
LEAP-Seq n confirming:103
LEAP-Seq n nonconfirming:95
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGGGAGGGGGTTTATTT
Suggested primer 2:TAGTTGGTCGTTGGTGGTGA