Insertion junction: LMJ.RY0402.043149_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.043149
Chromosome:chromosome 9
Location:3675408
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g390726 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAAATGAGAAAGACGACACTTGCAAGGAT
Internal bar code:AGCTTCTGGCACCTAGGGAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:630
LEAP-Seq percent confirming:99.111
LEAP-Seq n confirming:3902
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGCTGTCACCGTATGGAC
Suggested primer 2:GAGGCTTACGCAAAGGAGTG