Insertion junction: LMJ.RY0402.043188_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.043188
Chromosome:chromosome 13
Location:4653007
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g604250 (1 of 1) IPR002889//IPR003882//IPR013994 - Carbohydrate-binding WSC // Pistil-specific extensin-like protein // Carbohydrate-binding WSC, subgroup intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACCAAAACTATCAAGGTCCATTCGCTTG
Internal bar code:GCAGCTCCCGTATCTGTAGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:526
LEAP-Seq percent confirming:98.0
LEAP-Seq n confirming:147
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GTAAAGATGATGCGGCGATT
Suggested primer 2:ACACCTGCTACCTGTGGGAC