Insertion junction: LMJ.RY0402.043202_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.043202
Chromosome:chromosome 6
Location:2434231
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g268550 GTR,CGL121,CSL1 Cellulose-synthase-like 1; (1 of 1) 2.4.1.32 - Glucomannan 4-beta-mannosyltransferase / Glucomannan-synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGCGCCGCTGTAAAAATCCTCGCTCCTG
Internal bar code:AGGCTTTTGCCCACAGCATAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:410
LEAP-Seq percent confirming:98.7775
LEAP-Seq n confirming:404
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TCACGTAGCTGCATTGAAGG
Suggested primer 2:TGTCATAGACGTGGAGCAGC