Insertion junction: LMJ.RY0402.043286_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.043286
Chromosome:chromosome 9
Location:3680537
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g390801 (1 of 1) PTHR11918//PTHR11918:SF77 - RADICAL SAM PROTEINS // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAATGCGGGTTGTGGGTGCGTCCAGGGGC
Internal bar code:TCCATGGAGCCTTTTTTTGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1280
LEAP-Seq percent confirming:99.4336
LEAP-Seq n confirming:6495
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGGCCTTATGTCACTGGT
Suggested primer 2:CACTCGCTGTCCAAAACTCA