Insertion junction: LMJ.RY0402.043300_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.043300
Chromosome:chromosome 12
Location:1688991
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g485750 CGL128 (1 of 1) PTHR13420//PTHR13420:SF5 - UNCHARACTERIZED // UPF0235 PROTEIN; Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACACGATCCGACTGCTTTCCGCCCGCCC
Internal bar code:TGTACCAGTTCACTTGACACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:766
LEAP-Seq percent confirming:99.7337
LEAP-Seq n confirming:25096
LEAP-Seq n nonconfirming:67
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCGACCTCATCAGCAAG
Suggested primer 2:CAAGCCCTCAAAAATACCCA