Insertion junction: LMJ.RY0402.043365_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.043365
Chromosome:chromosome 1
Location:595570
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g003463 (1 of 1) K08735 - DNA mismatch repair protein MSH2 (MSH2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCTCACACATGTAGCCTGGCGCTACGGG
Internal bar code:AGGGGGGTGGCCTCTGTAGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:468
LEAP-Seq percent confirming:95.8773
LEAP-Seq n confirming:1000
LEAP-Seq n nonconfirming:43
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGTAGGGCTACAACCGC
Suggested primer 2:CCTGTGGTCGCAACACATAC