Insertion junction: LMJ.RY0402.043674_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.043674
Chromosome:chromosome 12
Location:8516909
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g547800 SNE15 (1 of 8) PTHR10366//PTHR10366:SF411 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 PROTEIN; NAD dependent epimerase/dehydratase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGACTCGTGCTCATGCATGTGGCAGGCGA
Internal bar code:TGACTGCCTGGTTAGACCATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:552
LEAP-Seq percent confirming:99.6223
LEAP-Seq n confirming:11869
LEAP-Seq n nonconfirming:45
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ATACGGAAGCTTTGCATTGG
Suggested primer 2:GAGCACACAGAAAAGGAGGC