Insertion junction: LMJ.RY0402.043871_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.043871
Chromosome:chromosome 1
Location:6858636
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre01.g049600 CGLD22 (1 of 1) K02116 - ATP synthase protein I (atpI); Assembly factor for chloroplast ATPase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGGGGCCAATTGTGTATTGGCTCGAGGG
Internal bar code:TCGGTTCATTTTTTCTCAACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1259
LEAP-Seq percent confirming:99.2908
LEAP-Seq n confirming:140
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCAAGCAACTGAAGGAAA
Suggested primer 2:TGTGTTTGATGGCAACCTGT