Insertion junction: LMJ.RY0402.044016_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.044016
Chromosome:chromosome 9
Location:4805790
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g397327 (1 of 1) PTHR11139:SF68 - DNA-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTACTGTTGCTGGAAAGCAGCACCGACA
Internal bar code:TCTATATCTGTTGTTATATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:303
LEAP-Seq percent confirming:99.2609
LEAP-Seq n confirming:5372
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGGACAGTGGTAAGGCAG
Suggested primer 2:GCCTCACAAAAGCTAGGCAC