Insertion junction: LMJ.RY0402.044088_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.044088
Chromosome:chromosome 9
Location:2893983
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g388351 PHC32 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 32 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTTCCCTTCTGTCACTCCTTCCGCCTGC
Internal bar code:CCAGGGCTCCGTCACAAATGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:294
LEAP-Seq percent confirming:99.8116
LEAP-Seq n confirming:2649
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCAGGTGTGGATGTCATA
Suggested primer 2:CAGCTTCATACACACCACGG