Insertion junction: LMJ.RY0402.044384_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.044384
Chromosome:chromosome 17
Location:1676103
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g708450 MMP33 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTAGCATATCGCACTGCATTTGATAAGT
Internal bar code:GCACTGTTCCCCGGCTCTGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:761
LEAP-Seq percent confirming:98.869
LEAP-Seq n confirming:6032
LEAP-Seq n nonconfirming:69
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGCTGTCCTTAAACATGG
Suggested primer 2:GCGGTAGCGGAGTTATACCA