Insertion junction: LMJ.RY0402.044594_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.044594
Chromosome:chromosome 10
Location:3645087
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g445650 SMC3 (1 of 1) K06669 - structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6) (SMC3, CSPG6); Structural Maintenance of Chromosomes protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAGGAGCCTGCCTCCACGCCCCGCCACG
Internal bar code:CGTGCAGGATGTCTGTAGACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:787
LEAP-Seq percent confirming:97.736
LEAP-Seq n confirming:2288
LEAP-Seq n nonconfirming:53
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TACATGTTTGGGAGGTGCAA
Suggested primer 2:ACCCTAGAGCGCACAAGAAA