Insertion junction: LMJ.RY0402.044716_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.044716
Chromosome:chromosome 13
Location:4534320
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g602750 (1 of 5) PTHR32467:SF15 - AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SMZ-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGCATTACGTCCTCCGCACTTGAGCAGA
Internal bar code:GGCACGGTGCCATCTTGCTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:649
LEAP-Seq percent confirming:98.3621
LEAP-Seq n confirming:4384
LEAP-Seq n nonconfirming:73
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCTCGGACACACACTTAT
Suggested primer 2:ACCTCATGGATGACTACGGC