Insertion junction: LMJ.RY0402.044732_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.044732
Chromosome:chromosome 3
Location:4056898
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g172500 PTO2,PTOX2 (1 of 2) K17893 - ubiquinol oxidase (AOX1, AOX2); Plastid terminal oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCATGACACCCACGCCGCCCGCACAGAT
Internal bar code:AACAGTCTGTTCGATGCACAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1097
LEAP-Seq percent confirming:44.8102
LEAP-Seq n confirming:5241
LEAP-Seq n nonconfirming:6455
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAATACACACCTGGCACG
Suggested primer 2:GTATGGTGTGGAGCGAAGGT