Insertion junction: LMJ.RY0402.044765_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.044765
Chromosome:chromosome 3
Location:1297088
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g150350 CPLD70 Conserved in the Plant Lineage and Diatoms; (1 of 5) K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCGTGTCCGTGTGCCTATGTGGATGTG
Internal bar code:TCAGGCACAAGGGAGTAACCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:520
LEAP-Seq percent confirming:99.4595
LEAP-Seq n confirming:552
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GATGAGCAGTTGGTGCAGAA
Suggested primer 2:TAAAGGCAAGAGAGCGGTGT