Insertion junction: LMJ.RY0402.044831_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.044831
Chromosome:chromosome 7
Location:1718973
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre07.g325711 (1 of 2) K19363 - lipopolysaccharide-induced tumor necrosis factor-alpha factor (LITAF) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTAGATGTGGGACAAGACGCTGCGCAGC
Internal bar code:CTGCCTAGCGGAGTGTAGAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:890
LEAP-Seq percent confirming:99.4616
LEAP-Seq n confirming:5542
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TACCTGTCGCACACACCATT
Suggested primer 2:GCTAAATGCTGCTCCTCACC