Insertion junction: LMJ.RY0402.044891_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.044891
Chromosome:chromosome 12
Location:6259468
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g537000 (1 of 1) PF02041 - Auxin binding protein (Auxin_BP) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAATGTTGTTACACGCGCGTACAAACAGC
Internal bar code:CCCGAGGGAATACTTCAATCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:776
LEAP-Seq percent confirming:99.7548
LEAP-Seq n confirming:2848
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ATACACGTACCGTGCGAACA
Suggested primer 2:CAGAAAGCTCCTTACCGACG