Insertion junction: LMJ.RY0402.044998_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.044998
Chromosome:chromosome 17
Location:1547409
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g707400 (1 of 1) PF00013//PF13014 - KH domain (KH_1) // KH domain (KH_3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGATAGCGGGCTCAAGAAAGCGCCCGCTG
Internal bar code:CGCTATCTAAGAGTCGGCGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:680
LEAP-Seq percent confirming:99.5026
LEAP-Seq n confirming:3201
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTTGAGTCCTGCTCAGCC
Suggested primer 2:GCACATTGTCCATTCGTCAC