Insertion junction: LMJ.RY0402.045123_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.045123
Chromosome:chromosome 9
Location:4204568
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g394251 PF16 Central pair associated protein; (1 of 1) PF00514//PF13513 - Armadillo/beta-catenin-like repeat (Arm) // HEAT-like repeat (HEAT_EZ) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCAGCTGCTCTGTTCACTTGAGTATTT
Internal bar code:TGGAGCTATCTCACTTGATGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1215
LEAP-Seq percent confirming:98.8353
LEAP-Seq n confirming:594
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GATGTGTCAGCGACGAAAGA
Suggested primer 2:ACAACTCGAAGTGGTTTGGG