Insertion junction: LMJ.RY0402.045238_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.045238
Chromosome:chromosome 9
Location:4628600
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g396624 (1 of 1) IPR000104//IPR001841//IPR002110//IPR016024//IPR020683 - Antifreeze protein, type I // Zinc finger, RING-type // Ankyrin repeat // Armadillo-type fold // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGTGCATGGTGCGTGGCACCTCGTAAA
Internal bar code:GGCTTGGCATATGTGTAGCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:329
LEAP-Seq percent confirming:46.3198
LEAP-Seq n confirming:365
LEAP-Seq n nonconfirming:423
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCTCCTTTAAACTTTCCG
Suggested primer 2:ATGGTGAGGAAGGTGTCGAG