Insertion junction: LMJ.RY0402.045256_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.045256
Chromosome:scaffold 40
Location:21337
Confidence (%):58
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGTTTTAGGGTTTAGGGTTTAGGGTTTT
Internal bar code:TAATAGGGCAGTAAATCTTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:531
LEAP-Seq percent confirming:72.9412
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTAAAACCCTAAAACCC
Suggested primer 2:GAAACCTGCAAAACCCGTTA