Insertion junction: LMJ.RY0402.045273_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.045273
Chromosome:chromosome 17
Location:4336858
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g731050 (1 of 1) PTHR12847//PTHR12847:SF5 - ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED // CCR4-ASSOCIATED FACTOR 16 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCTGGATTCACTGCGCTAGCGCTCGCAA
Internal bar code:GCCCCCGTGGCGTCCCTCGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:937
LEAP-Seq percent confirming:99.5871
LEAP-Seq n confirming:1447
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCTCTCCGCTCAGCTTTG
Suggested primer 2:ACAATCTGAGGGAACCGTTG