Insertion junction: LMJ.RY0402.045611_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.045611
Chromosome:chromosome 1
Location:6993732
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g050500 PPR1 Pentatrichopeptide repeat protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTGACCCTGAGGCCCACGAACCATAAGC
Internal bar code:CACTGCACGCATGAGGCGACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:826
LEAP-Seq percent confirming:79.1613
LEAP-Seq n confirming:1850
LEAP-Seq n nonconfirming:487
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGTCTGTGGCTCTGTCTT
Suggested primer 2:GCTAGAGTATGACCTGCGGC