Insertion junction: LMJ.RY0402.045906_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.045906
Chromosome:chromosome 17
Location:646276
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g700500 (1 of 1) PTHR23196//PTHR23196:SF13 - PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTACCTCGCTAATCCCAACCCCAAACC
Internal bar code:CGGAAGTTTGTTGGCCCCTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:237
LEAP-Seq percent confirming:81.0256
LEAP-Seq n confirming:474
LEAP-Seq n nonconfirming:111
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGGTTGTGTCCATCAGC
Suggested primer 2:CATGTTACCCACCAACACCA