Insertion junction: LMJ.RY0402.045937_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.045937
Chromosome:chromosome 1
Location:3583837
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre01.g023050 UBX2 (1 of 2) IPR006567//IPR018997 - PUG domain // PUB domain; Ubiquitin-associated protein CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGGTATGGCGGGCTGAAGGGGCTGGGA
Internal bar code:ACGTACGAACGCTAAAAGCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:40
LEAP-Seq percent confirming:97.389
LEAP-Seq n confirming:373
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTGGTTTCTTGAGCTGTG
Suggested primer 2:TTGATGCAGTACAGGGCAAG