Insertion junction: LMJ.RY0402.046098_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.046098
Chromosome:chromosome 17
Location:3668050
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g726650 CGL96 (1 of 1) K14839 - nucleolar protein 16 (NOP16); Conserved in the Green Lineage 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTAAGAAGCGCGAGAGCGCGAGGGTGCC
Internal bar code:TTTGGGTCAGGACACTTAATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:708
LEAP-Seq percent confirming:99.5419
LEAP-Seq n confirming:3694
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTGAGCACCTGACTCCT
Suggested primer 2:TGCAGTACGAGCGGTATGAG