Insertion junction: LMJ.RY0402.046099_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.046099
Chromosome:chromosome 10
Location:1086500
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre10.g425400 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGCACCTCCCTGCTTTCCTTGCTCGAT
Internal bar code:TCGCTGGATAGGACGTGGCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:441
LEAP-Seq percent confirming:99.852
LEAP-Seq n confirming:2698
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTCGCTGATGTGTTTGT
Suggested primer 2:GCTCCTGCTCTTCACAACCT