Insertion junction: LMJ.RY0402.046121_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.046121
Chromosome:chromosome 1
Location:3365274
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g021300 (1 of 2) IPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCAGTAGCGCTCCAGCGCCTTGACAAT
Internal bar code:CCAGTTCGCAATCACATGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:77
LEAP-Seq percent confirming:38.141
LEAP-Seq n confirming:238
LEAP-Seq n nonconfirming:386
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCCGAACAACTGCCTTTA
Suggested primer 2:GCACATATCCGTGCAATGAC