Insertion junction: LMJ.RY0402.046151_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.046151
Chromosome:chromosome 3
Location:4058678
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g172500 PTO2,PTOX2 (1 of 2) K17893 - ubiquinol oxidase (AOX1, AOX2); Plastid terminal oxidase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTGTTGCAGGCATCATATGGAAGTTCAC
Internal bar code:ATTCAGCCGGTCTTTCTTGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1145
LEAP-Seq percent confirming:96.1404
LEAP-Seq n confirming:822
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAACACCCAGCAATACCG
Suggested primer 2:AGTGATAAGCCCGTGTGGAC