Insertion junction: LMJ.RY0402.046480_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.046480
Chromosome:chromosome 16
Location:1106183
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g649800 PPR3,CYCR6 (1 of 1) PF02984//PF13041 - Cyclin, C-terminal domain (Cyclin_C) // PPR repeat family (PPR_2); PentatricoPeptide Repeat protein 3 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCCTGTTAAGGGTGTTGCGATGTCGTCA
Internal bar code:ATAATAATCGCCGAGCGGTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:912
LEAP-Seq percent confirming:99.527
LEAP-Seq n confirming:4840
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:ACATATCTACGACGACCGGC
Suggested primer 2:TGCTTCAGAGGCGATGTATG