Insertion junction: LMJ.RY0402.046480_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.046480
Chromosome:chromosome 16
Location:1106203
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g649800 PPR3,CYCR6 (1 of 1) PF02984//PF13041 - Cyclin, C-terminal domain (Cyclin_C) // PPR repeat family (PPR_2); PentatricoPeptide Repeat protein 3 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATTTATCCCCTCGCGGCCGCGGGTGCAC
Internal bar code:ATCTTGGAGAGCCCTCGACATG

Confirmation - LEAP-Seq

LEAP-Seq distance:835
LEAP-Seq percent confirming:99.7322
LEAP-Seq n confirming:5586
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACATATCTACGACGACCGGC
Suggested primer 2:TGCTTCAGAGGCGATGTATG