Insertion junction: LMJ.RY0402.046677_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.046677
Chromosome:chromosome 16
Location:5107041
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g683953 (1 of 19) PTHR31251//PTHR31251:SF1 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAAATAAAATGCGGGCCGACGTTTATGTA
Internal bar code:GGCCCTCTGTTACCAGTTTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:81
LEAP-Seq percent confirming:77.2201
LEAP-Seq n confirming:10478
LEAP-Seq n nonconfirming:3091
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTGTGTGTGTGTGTGTGT
Suggested primer 2:CCTCACATCTGAGCCAGACA