Insertion junction: LMJ.RY0402.046693_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.046693
Chromosome:chromosome 17
Location:3448559
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g724700 PAO3,Tic55-like3,TIC55-3,PAO1 Pheophorbide a oxygenase-related protein; (1 of 3) K13071 - pheophorbide a oxygenase (PAO, ACD1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGTTGTCGTAGTCTCCTCACAACATGCC
Internal bar code:GCGTGGGGACGCCCCCCAGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:213
LEAP-Seq percent confirming:78.3887
LEAP-Seq n confirming:613
LEAP-Seq n nonconfirming:169
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ATGATCCCTTGAAGGCACTG
Suggested primer 2:AGTGCGCTATCGGAATCACT