Insertion junction: LMJ.RY0402.046696_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.046696
Chromosome:scaffold 36
Location:15190
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre36.g759697 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTTGGGACTGGTGGCGGGGAAGGGGAGA
Internal bar code:ATTGCCCTCACATTGTCTTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:895
LEAP-Seq percent confirming:99.4432
LEAP-Seq n confirming:12502
LEAP-Seq n nonconfirming:70
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCTACCAAAAAGAGCGG
Suggested primer 2:TGTAGGTGTAGTTGCGGCAG