Insertion junction: LMJ.RY0402.046696_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.046696
Chromosome:scaffold 36
Location:15199
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre36.g759697 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCCTGACGTCCACAAGATCTCTCAGAGG
Internal bar code:CCGCTTATCTGGCCTGCAGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:355
LEAP-Seq percent confirming:95.4304
LEAP-Seq n confirming:1796
LEAP-Seq n nonconfirming:86
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCTACCAAAAAGAGCGG
Suggested primer 2:TGTAGGTGTAGTTGCGGCAG