Insertion junction: LMJ.RY0402.046789_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.046789
Chromosome:chromosome 17
Location:1906963
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g710300 PHC31 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 31 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCCAGGGCTGCAGCAGGTTGGCGTCCTC
Internal bar code:AAGCCAAAAAATAGTGCATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:207
LEAP-Seq percent confirming:99.8426
LEAP-Seq n confirming:1903
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:AGATCTGCATGACCCTGGAC
Suggested primer 2:GGTCCACCACTCAATCTTGG