Insertion junction: LMJ.RY0402.046801_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.046801
Chromosome:chromosome 3
Location:3237195
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g165600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCATGTCGGGTGTGTCGTGTAGGGTCGT
Internal bar code:TCTACGTGTTGTCCGCGCGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:532
LEAP-Seq percent confirming:99.6795
LEAP-Seq n confirming:4043
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGTATGTCCGATGGTGC
Suggested primer 2:AATGGCTGTGTTTAGGCAGG