Insertion junction: LMJ.RY0402.046824_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.046824
Chromosome:chromosome 6
Location:2050009
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre06.g264550 CGL81 (1 of 4) PF09366 - Protein of unknown function (DUF1997) (DUF1997); Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATCCGGGCCGATTGCCTGAACGCCCAAT
Internal bar code:AGGAATGTTTGCGCATTCTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:976
LEAP-Seq percent confirming:99.7575
LEAP-Seq n confirming:1234
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCCTTTAGGGAAAGGTG
Suggested primer 2:ACCATTGTAACCGTACCCCA