Insertion junction: LMJ.RY0402.046929_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.046929
Chromosome:chromosome 7
Location:5142916
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre07.g348040 (1 of 4) PTHR11785//PTHR11785:SF367 - AMINO ACID TRANSPORTER // AMINO-ACID PERMEASE BAT1; Probable amino acid/metabolite permease 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCTGAATCGCTTCGCACGCGGGTCTCAG
Internal bar code:CGAGATCAAAGTGGGGACATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:621
LEAP-Seq percent confirming:99.3099
LEAP-Seq n confirming:4317
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCTGAGTCGCACATAAA
Suggested primer 2:AGCAGCAGTAGCAGAGGAGC