Insertion junction: LMJ.RY0402.047037_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.047037
Chromosome:chromosome 4
Location:2026522
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre04.g218900 (1 of 2) PTHR10887//PTHR10887:SF333//PTHR13779//PTHR13779:SF20 - DNA2/NAM7 HELICASE FAMILY // SUBFAMILY NOT NAMED // HOLLIDAY JUNCTION DNA HELICASE RUVB-RELATED // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGGGAAAGAAAGTTTATCCCCGAGTTAA
Internal bar code:GCGTCGCGACGGCTCAGCAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:480
LEAP-Seq percent confirming:55.9937
LEAP-Seq n confirming:355
LEAP-Seq n nonconfirming:279
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGTTGTTATTGCTGGTG
Suggested primer 2:CGCCCAGAGACACTAGGAAG