Insertion junction: LMJ.RY0402.047037_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.047037
Chromosome:chromosome_4
Location:2026522
Confidence (%):58
Locus systematic id Locus common name Defline Orientation Feature
Cre04.g218900 sense 3'UTR

Insertion site details

Flanking sequence (orientation from cassette outwards):TTTGGGAAAGAAAGTTTATCCCCGAGTTAA
Internal bar code:GCGTCGCGACGGCTCAGCAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:480
LEAP-Seq percent confirming:55.9937
LEAP-Seq n confirming:355
LEAP-Seq n nonconfirming:279
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGTTGTTATTGCTGGTG
Suggested primer 2:CGCCCAGAGACACTAGGAAG