Insertion junction: LMJ.RY0402.047040_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.047040
Chromosome:chromosome 17
Location:3801206
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g727801 (1 of 80) IPR003882 - Pistil-specific extensin-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATCAGCTATTCCGGCATGCGATCACAGA
Internal bar code:CCGGGTCACTCTCCAGTGATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:487
LEAP-Seq percent confirming:95.7065
LEAP-Seq n confirming:1226
LEAP-Seq n nonconfirming:55
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGAACAAACTGCCTAGC
Suggested primer 2:GTGGGAGTAGGAGCAGCAGT