Insertion junction: LMJ.RY0402.047040_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.047040
Chromosome:chromosome 17
Location:3801206
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g727801 (1 of 80) IPR003882 - Pistil-specific extensin-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCCAGGTTTGCGCCTGGCAGCATGCGGT
Internal bar code:TCACGACTGTTACCTCCGGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:786
LEAP-Seq percent confirming:99.5402
LEAP-Seq n confirming:1299
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGAACAAACTGCCTAGC
Suggested primer 2:GTGGGAGTAGGAGCAGCAGT