Insertion junction: LMJ.RY0402.047083_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.047083
Chromosome:chromosome 5
Location:2860384
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g237870 5'UTR
Cre05.g237890 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGAGGAGGGGCAGGTGGACAGCGCGGT
Internal bar code:AAGGGAATCTGAGAGCGGACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:483
LEAP-Seq percent confirming:97.3118
LEAP-Seq n confirming:1448
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGATACGGTACGGGGAAG
Suggested primer 2:GCCACTCACAAGGAGAAAGC