Insertion junction: LMJ.RY0402.047083_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.047083
Chromosome:chromosome 5
Location:2860384
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g237870 5'UTR
Cre05.g237890 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCCGAGGCGCAGCGCTGCTTGCCCCTTG
Internal bar code:GCAACAGTGCAAGTTAGCGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:921
LEAP-Seq percent confirming:94.8798
LEAP-Seq n confirming:5485
LEAP-Seq n nonconfirming:296
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACTCACAAGGAGAAAGC
Suggested primer 2:AAGGATACGGTACGGGGAAG