Insertion junction: LMJ.RY0402.047139_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.047139
Chromosome:chromosome 3
Location:4140417
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g173450 PAO4 Pheophorbide a oxygenase-related protein; (1 of 8) 1.14.12.20 - Pheophorbide a oxygenase / Pheide a oxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGAGCACGGAGCAGTGCGGGGTTTGCGT
Internal bar code:GATGGGGCGGAGTGTGGCGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:798
LEAP-Seq percent confirming:97.286
LEAP-Seq n confirming:466
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGACTTGTCCCAATGCT
Suggested primer 2:GTATTCATCACCCGTCGCTT