Insertion junction: LMJ.RY0402.047243_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.047243
Chromosome:chromosome 5
Location:1416756
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g244200 TMA1,COTH2 spore coat protein H; (1 of 3) PF08757 - CotH protein (CotH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTGGGTGTGGGTGCTGAAAACTGCAATG
Internal bar code:CGCCGCGGCCCCGTTGATTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:208
LEAP-Seq percent confirming:97.8218
LEAP-Seq n confirming:2470
LEAP-Seq n nonconfirming:55
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACGACTTTACAAAGCCCCCT
Suggested primer 2:ACAGCTGTTGTATGGGGAGG